CpG Density Identification and Genomic Sequence Analysis and Bioinformatics.
DNA Methylation Analysis
Specific Genomic Location Analysis
- Methylation Specific PCR.
- Bisulfite Sequencing.
- Bisulfite Pyrosequencing.
- Qiagen PyroMark Pyrosequencer Instrumentation.
Genome Wide Analysis
- High Throughput Sequencing Methylation Analysis.
- Methyl-Sensitive Cut Counting (MSCC), Ball et al. 2009*
- Methyl CpG Binding Domain - Isolated Genome Sequencing (MiGS)
Serre et al. 2010**
Chromatin Immunoprecipitation Analysis (ChIP)
- Analysis of Histone Modifications.
- DNA-Protein Interactions.
- Chromatin Positions analyzed using:
- Quantitative PCR Analysis (Real-Time QPCR).
- High Throughput Sequencing Analysis (ChIP-Seq).
Gene Expression Analysis (QPCR)
- Real-Time Quantitative PCR Gene Expression.