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Email: mmihgl@unmc.edu
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Cytogenetics Laboratory
Zip 5440
UNMC Shipping & Receiving Dock
668 South 41 Street
Omaha, NE 68105
Gene(s) involved
COL2A1 located on chromosome 12q13.11.
Brief description
COL2A1 is involved in the production of type II collagen. Type II collagen is primarily found in cartilage and provides connective tissues with structure and strength in order to support muscles, joints, skin, and organs. In addition to the cartilage that covers and protects bones, Type II collagen is found in the eye (vitreous fluid), nose, outer and inner ear, and the nucleus pulposus in the spine. Disorders associated with mutations and deletions of the COL2A1 gene are termed as “type II collagenopathies” and are characterized by skeletal malformations such as short fingers and toes, shortened arms and legs, short stature, unequal bone length in the legs and/ or arms, flattened vertebrae, and distinct craniofacial findings. Additional clinical findings include conductive hearing loss, immune disorder, joint problems, over-flexibility of the joints, vision problems, retinal detachment, a flattened chest, and hip problems.
The incidence of COL2A1 associated disorders is unknown, however the prevalence of hereditary conditions of bone and cartilage is thought to lie between 250 and 350 cases per million.
Associated Disorders
Inheritance pattern
Type II collagenopathies may be inherited in an X-linked or autosomal dominant fashion and often arise from de novo genetic mutations.
Genetics
Type II collagenopathies are caused by mutations or deletions in the COL2A1 gene located on chromosome 12q13.11.
Reasons for referral
Test method at this facility
Array CGH.
Mutation analysis for type II collagenopathies is not offered at this facility.
Test sensitivity
Array CGH will detect 98-100% of deletions/ duplications; however, deletions/ duplications smaller than 100 kb will not be detected on aCGH.
Specimen requirements
For aCGH:
Blood:
Adult: 3-5 ml peripheral blood in a sodium-heparin tube.
Newborn: 1-3 ml blood in a sodium-heparin tube.Transport at room temperature. Deliver ASAP with a completed Cytogenetics & Molecular Cytogenetics Requisition form. Notify HGL by calling (402) 559-5070 when specimen is being shipped.
Shipping and handling information
Turn-around-time
Array CGH: 7-14 days
CPT codes
Array CGH - 83892 (x2), 88384, 88386, 88230, 88385, 88291
**Additional costs for DNA extraction and storage may apply.**
References
Genetic Home Reference: (http://ghr.nlm.nih.gov/gene=col2a1)
OMIM: (http://www.ncbi.nlm.nih.gov/entrez/dispomim.cgi?id=120140)
The information contained on this page is subject to change.
Updated: 10/9/2009