1st year Ph.D.student
B.S., University of Nebraska at Omaha, Omaha, NE
Dr. Hesham Ali
Julia Warnke, Hesham Ali, An Efficient and Scalable Graph Modeling Approach for Capturing Various Levels of Information in Next Generation Sequencing Reads. To appear in BMC Bioinformatics Special Issue.
Yu J, Warnke J, and Lyubchenko YL, (2011). Nanoprobing of Alpha-Synuclein Misfolding and Aggregation with Atomic Force Microscopy. Nanomedicine: Nanotechnology, Biology, and Medicine , 7 (2), 146-152.
Warnke J, and Ali H, (2012). An Efficient Overlap Graph Coarsening Approach for Modeling Short Reads. Paper presented at the IEEE BIBM 2012 workshop in Data-mining of Next Generation Sequencing.
Warnke J, Pawaskar S, and Ali H, (2012). An Energy Aware Bioinformatics Application for Assembling Short Reads in High Performance Computing Systems. Paper presented at the 2012 International Conference on High Performance Computing and Simulation.
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