>rrm-1 IYVGNLMFQVTDKDIAREFSQQGRFVYIHLKSGRVTGRRDGFGYILFTTY KDAHQALSTLGGFYVNSRNLSC >rrm-2 LYIRNLDTVTEKQSMLTEFSPFGDDLHLRAIKNSDASSSANSKGFAFIDF KDEDSAEAAFRKLGEIPINGSTLDV >rrm-3 (Psi-blast) AYVSRLSYDTTEEHVREAFGNFPPIVSALLINDCNNFGFIEFKDREETAH IMEGLPKTDFNNVSVKK >rrm-4 LFIIGLPDETSESQLRQIFAAFGGVCTFNLIKQPVTRLTSERNKCRGYAF VIYQNKEDAANARNLNGIAINNRIVRV >rrm-5 LYVGDVSYQIQTTSVLIYFSPEGDKTTISMILQKNNDGKGFVHFPKHPSA TDIPDRMDGSELLGKKLAL >rrm-6 YIGGLAEKINKSELSLLFGRFGSSMSAKVVKIRQTNRNQPMCFISFKTEE DTNMAMKEMFNKEFLGCELDV >rrm-7 LFVKNLEPMETTDEDVRAFFTKNGVLKECNMIVDKETGHLRGKGALNFED PVSAEKAVRNLNGGKFNSNEATL >rrm-8 VKIRGLDQGATGKAIRDAFNQYGNLIVIIVVMDTNSRQFNMGFIEFKDQL DANVALREKDGIPVLNERSAV >rrm-9(good seq for testing BLOSSUM matrices) LYIGDLPDAIRDDDLKDLFRKFGEIETIKAISSGVPTRARGYAFVRFARY EDIREALDEKEGYQPCDYAEKI >rrm-10 LFLSNLPRDCNRHKLRDMFSKYGLIVKIRAHPDKDTGPTRGYAFVQFKSS EDVDKAKALNKYFLGLRKIRV GFP (SYG) residues 65-67 in Aequorea victoria PHI patterns: x(5)SYGx(1,3) >gi|18175269|gb|AAK02065.1| GFP MSKGEELFTGIVPVLIELDGDVHGHKFSVRGEGEGDADYGKLEIKFICTT GKLPVPWPTLVTTLSYGILCFARYPEHMKMNDFFKSAMPEGYIQERTIFF QDDGKYKTRGEVKFEGDTLVNRIELKGMDFKEDGNILGHKLEYNFNSHNV YIMPDKANNGLKVNFKIRHNIEGGGVQLADHYQTNVPLGDGPVLIPINHY LSTQTAISKDRNETRDHMVFLEFFSACGHTHGMDELYK Sequences for Clustalw, Mview and Jalview Mirochondrial Porin sequences >PORIN_HUMAN MSWCNELRLPALKQHSIGRGLESHITMCIPPSYADLGKAARDIFNKGFGFGLVKLDVKTKSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEI AIEDQICQGLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGYQMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVNDGTEFGGSIYQ KVCEDLDTSVNLAWTSGTNCTRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINAGGHKVGSPWSWRLNPAERNLWEWISEDLALIYFHCDQ QQAFFPPEDDQNKG >POR1_MOUSE MAVPPTYADLGKSARDVFTKGYGFGLIKLDLKTKSENGLEFTSSGSANTETTKVNGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLARGLKLTFDSSFSPNTGKKN AKIKTGYKREHINLGCDVDFDIAGPSIRGALVLGYEGWLAGYQMNFETSKSRVTQSNFAVGYKTDEFQLHTNVNDGTEFGGSIYQKVNKKLETAVNLAWTAGNSNTRFGIA AKYQVDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNAGGHKLGLGLEFQ >POR3_BOVIN MCNTPTYCDLGKAAKDVFNKGYGFGMVKIDLRTKSCSGVEFSTSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISWENKLAEGLKLTLDTIFVPNTGKKS GKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGYQMSFDTAKSKLSQNNFALGYKAADFQLHTHVNDGTEFGGSIYQKVNEKIETSINLAWTAGSNNTRFGIA AKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNAGGHKVGLGFELE >PORI_DROME MAPPSYSDLGKQARDIFSKGYNFGLWKLDLKTKTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYGLTLTEKWNTDNTLFTEVAVQDQLLEGLKLSLEGNFAPQSGNKNG KFKVAYGHENVKADSDVNIDLKGPLINASAVLGYQGWLAGYQTAFDTQQSKLTTNNFALGYTTKDFVLHTAVNDGQEFSGSIFQRTSDKLDVGVQLSWASGTSNTKFAIGA KYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTLVDGKNFNAGGHKIGVGLELE >POR4_SOLTU GPGLYTEIGKKARDLLYKDYQSDHKFSITTYSPTGVVITSSGSKKGDLFLADVNTQLKNKNVTTDIKVDTNSNLFTTITVDEAAPGLKTILSFRVPDQRSGKLEVQYLHDY AGICTSVGLTANPIVNFSGVVGTNIIALGTDVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNHSFSTNENIITVGTQHRLDPLT SVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDKGAKFGLALALK >POR1_WHEAT_1_274 MGGPGLYSGIGKKAKDLLYRDYQTDHKFTLTTYTANGPAITATSTKKADLTVGEIQSQIKNKNITVDVKANSASNVITTITADDLAAPGLKTILSFAVPDQKSGKVELQYL HDYAGINASIGLTANPVVNLSGAFGTSALAVGADVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVEKSGTAVGAELTHSFSSNENSLTFGTQHTLDP LTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEKSSKVGIAIALK >POR6_SOLTU GPGLYSDIGKKARDLLYRDYVSDHKFTVTTYSTTGVAITASGLKKGELFLADVSTQLKNKNITTDVKVDTNSNVYTTITVDEPAPGLKTIFSFVVPDQKSGKVELQYLHEY AGINTSIGLTASPLVNFSGVAGNNTVALGTDLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTHSFSSNENTLTIGTQHLLDPLT TVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEKSAKIGLAVALK >POR1_ARATH GPGLYTEIGKKARDLLYKDHNSDQKFSITTFSPAGVAITSTGTKKGDLLLGDVAFQSRRKNITTDLKVCTDSTFLITATVDEAAPGLRSIFSFKVPDQNSGKVELQYLHEY AGISTSMGLTQNPTVNFSGVIGSNVLAVGTDVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSHKLSSKDSTITVGTQHSLDPLT SVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDKSAKVGLALALK >PORI_NEUCR MAVPAFSDIAKSANDLLNKDFYHLAAGTIEVKSNTPNNVAFKVTGKSTHDKVTSGALEGKFTDKPNGLTVTQTWNTANALETKVEMADNLAKGLKAEGIFSFLPATNARGA KFNLHFKQSNFHGRAFFDLLKGPTANIDAIVGHEGFLAGASAGYDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYYHKVNSQVEAGSKATWNSKTGNTVGLEVA TKYRIDPVSFVKGKINDRGVAAIAYNVLLREGVTLGVGASFDTQKLDQATHKVGTSFTFE >POR1_YEAST PPVYSDISRNINDLLNKDFYHATPAAFDVQTTTANGIKFSLKAKQPVKDGPLSTNVEAKLNDKQTGLGLTQGWSNTNNLQTKLEFANLTPGLKNELITSLTPGVAKSAVLN TTFTEPFFTARGAFDLCLKSPTFVGDLTMAHEGIVGGAEFGYDISAGSISRYAMALSYFAKDYSLGATLNNEQITTVDFFQNVNAFLQVGAKATMNCKLPNSNVNIEFATR YLPDASSQVKAKVSDSGIVTLAYKQLLRPGVTLGVGSSFDALKLSEPVHKLGWSLSF ATAB Test Sequences >143B_BOVIN cyt TMDKSELVQKAKLAEQAERYDDMAAAMKAVTEQGHELSNEERNLLSVAYKNVVGARRSSW RVISSIEQKTERNEKKQQMGKEYREKIEAELQDICNDVLQLLDKYLIPNATQPESKVFYL KMKGDYFRYLSEVASGDNKQTTVSNSQQAYQEAFEISKKEMQPTHPIRLGLALNFSVFYY EILNSPEKACSLAKTAFDEAIAELDTLNEESYKDSTLIMQLLRDNLTLWTSENQGDEGDA GEGEN >DBI5_MOUSE cyt MSQVEFEMACASLKQLKGPVSDQEKLLVYSFYKQATQGDCNIPVPPATDVRAKAKYEAWM VNKGMSKMDAMRIYIAKVEELKKKEPC >RT09_HUMAN mitochondrial MAAPCVSYGGAVSYRLLLWGRGSLARKQGLWKTAAPELQTNVRSQILRLRHTAFVIPKKN VPTSKRETYTEDFIKKQIEEFNIGKRHLANMMGEDPETFTQEDIDRAIAYLFPSGLFEKR ARPVMKHPEQIFPRQRAIQWGEDGRPFHYLFYTGKQSYYSLMHDVYGMLLTLEKHQSHWQ AKSLLPEKTVTRDVIGSRWLIKEELEEMLVGKLSDLDYMQFIRLLEKLLTSQCGAAEEEF VQRFRRSVTLESKKQLIEPVQYDEQGMAFSKSEGKRKTAKAEAIVYKHGSGRIKVNGIDY QLYFPITQDREQLMFPFHFVDRLGKHDVTCTVSGGGRSAQAGAIRLAMAKALCSFVTEDE VEWMRQAGLLTTDPRVRERKKPGQEGARRKFTWKKR >gi|16554607|ref|NP_060611.2| (NM_018141) mitochondrial MAARTAFGAVCRRLWQGLGNFSVNTSKGNTAKNGGLLLSTNMKWVQFSNLHVDVPKDLTK PVVTISDEPDILYKRLSVLVKGHDKAVLDSYEYFAVLAAKELGISIKVHEPPRKIERFTL LQSVHIYKKHRVQYEMRTLYRCLELEHLTGSTADVYLEYIQRNLPEGVAMEVTKTQLEQL PEHIKEPIWETLSEEKEESKS N-Glycosylation Example Top of Form 1 >gi|9256644|ref|NP_061349.1| solute carrier family 1 [Mus musculus] MEKSGETNGYLDGTQAEPAAGPRTPETAMGKSQRCASFFRRHALVLLTVSGVLVGAGMGAALRGLQLTRT QITYLAFPGEMLLRMLRMIILPLVVCSLVSGAASLDASSLGRLGGIAVAYFGLTTLSASALAVALAFIIK PGAGAQTLQSSSLGLENSGPPPVSKETVDSFLDLLRNLFPSNLVVAAFTTSATDYTVVTHNTSSGNVTKE KIPVVTDVEGMNILGLVLFALVLGVALKKLGPEGEDLIRFFNSFNEATMVLVSWIMWYVPIGIMFLIGSK IVEMKDIVMLVTSLGKYIFASMLGHVIHGGIVLPLVYFAFTRKNPFTFLLGLLTPFATAFATCSSSATLP SMMKCIEENNGVDKRISRFILPIGATVNMDGAAIFQCVAAVFIAQLNNVDLNAGQIFTILVTATASSVGA AGVPAGGVLTIAIILEAIGLPTHDLSLILAVDWIVDRTTTVVNVEGDALGAGILNHLNQKVVKKGEQELQ EVKVEAIPNSKSEEETSPLVTHQNPAGPVAIAPELESKESVL Bottom of Form 1 Phosphorylation Example >seq2 ASQKRPSQRHGSKYLATASTMDHARHGFLPRHRDTGILDSIGRFFGGDRGAPK NMYKDSHHPARTAHYGSLPQKSHGRTQDENPVVHFFKNIVTPRTPPPSQGKGR KSAHKGFKGVDAQGTLSKIFKLGGRDSRSGSPMARRELVISLIVES >A60D_DROME (SEG-test sequence) MNALLRHKGRNLRTSHLAQNVYKRFLKSNCCACSSVNVTDEPAKEDELPRRSASTSVLEL SRSLGTYRRFQPHANYGYDYSGYGFRHLHTSRTLLETSSSKIDATVKKLKNQQKEKVEEI MKEVANGQAAAVRASSAATATASSEKGQNASATAGSTSATASTTSLAKTADKSVAKPKKP LRTRIWDELVHYYHGFRLLFIDVAICSKLLWRVLNGKTLTRRENKQLQRTTSDLFRLIPF SVFIIVPFMELLLPLFIKFFPGMLPSTFQTSTDRQEKLRQSLSVRLEVAKFLQQTLDQMP VQHKEHSSEEAKQFEAFFTKIRNPTEPVSNDEIIKFAKRFDDEITLDSLSREQLAALCRV LELNTIGTTTLLRFQLRLKLRSLATDDRVIAREGVDSLDLLELQQACKARGMRAYGLTEE RLRFQLKEWIDLSLNEQVPPTLLLLSRTMLISDDSITTDKLKETIRVLPDAVGAHTRHAI GESEGKVDNKTKIEIIKEEERKIREEREEEREETIAKRSAIKEEIPAPYVFAEKLSGSQD LLDHKEQSSVSETDKGISSTDVQLLSEALKTLSSDKQLVVEKETIKELKEELADYKEDVE ELREVRQVVKEPVRESRAAKLLYNRVNKMISQLDNVLNDLEARQHQIKQAESSDYAASSP TVEPQQMVHIDELVATIRRMKEASDEERFKVVGDLLVKLDADKDGVISVNEITKAVQSID REATNIDKKQLEEFTELLSKLASRRRHEEIVHIDDLMNNIKVLKETSDEARLKHIEAVLE KFDADKDGVVTVNDIRKVLESIGRDNIKLSDKAIEELISLLDKEQVLQAEQKIEKAIAKS MKEAEKLKSEVDKADKDLSKLVNDIHDSAKEIQDIANEMRDKEETVPDKAKELKAEPAFK DTAKTLKDNAKDLDDLAKDPKSDPKSPTKASTGSGPAGLSGGGPSSGSSGIATGSTTESA LREAAERQMEKILPSTDIGLPPTIQTPSQPPTSKKATATASTLSTTITAKKLL CLUSTAL W (1.83) multiple sequence alignment PORIN_HUMAN MSWCNELRLPALKQHSIGRGLESHITMCIPPSYADLGKAARDIFNKG-FGFGLVKLDVKT POR1_MOUSE_14_295 --------------------------MAVPPTYADLGKSARDVFTKG-YGFGLIKLDLKT POR3_BOVIN_1_282 --------------------------MCNTPTYCDLGKAAKDVFNKG-YGFGMVKIDLRT PORI_DROME_1_281 ---------------------------MAPPSYSDLGKQARDIFSKG-YNFGLWKLDLKT PORI_NEUCR_1_282 ---------------------------MAVPAFSDIAKSANDLLNKDFYHLAAGTIEVKS POR1_YEAST_3_281 -----------------------------PPVYSDISRNINDLLNKDFYHATPAAFDVQT POR4_SOLTU_3_274 ----------------------------GPGLYTEIGKKARDLLYKD--YQSDHKFSITT POR6_SOLTU_3_274 ----------------------------GPGLYSDIGKKARDLLYRD--YVSDHKFTVTT POR1_ARATH_3_274 ----------------------------GPGLYTEIGKKARDLLYKD--HNSDQKFSITT POR1_WHEAT_1_274 --------------------------MGGPGLYSGIGKKAKDLLYRD--YQTDHKFTLTT : :.: .*:: :. : : : PORIN_HUMAN KSCSGVEFSTSGSSNTDTGKVTGTLETKYKWCEYGLTFTEKWNTDNTLGTEIAIEDQICQ POR1_MOUSE_14_295 KSENGLEFTSSGSANTETTKVNGSLETKYRWTEYGLTFTEKWNTDNTLGTEITVEDQLAR POR3_BOVIN_1_282 KSCSGVEFSTSGHAYTDTGKASGNLETKYKICNYGLTFTQKWNTDNTLGTEISWENKLAE PORI_DROME_1_281 KTSSGIEFNTAGHSNQESGKVFGSLETKYKVKDYGLTLTEKWNTDNTLFTEVAVQDQLLE PORI_NEUCR_1_282 NTPNNVAFKVTGKS-THDKVTSGALEGKFTDKPNGLTVTQTWNTANALETKVEMADNLAK POR1_YEAST_3_281 TTANGIKFSLKAKQPVKDGPLSTNVEAKLNDKQTGLGLTQGWSNTNNLQTKLEFAN-LTP POR4_SOLTU_3_274 YSPTGVVITSSGSK--KGDLFLADVNTQLKNKN--VTTDIKVDTNSNLFTTITVDE-AAP POR6_SOLTU_3_274 YSTTGVAITASGLK--KGELFLADVSTQLKNKN--ITTDVKVDTNSNVYTTITVDE-PAP POR1_ARATH_3_274 FSPAGVAITSTGTK--KGDLLLGDVAFQSRRKN--ITTDLKVCTDSTFLITATVDE-AAP POR1_WHEAT_1_274 YTANGPAITATSTK--KADLTVGEIQSQIKNKN--ITVDVKANSASNVITTITADDLAAP : . :. . . : : : . . . : PORIN_HUMAN GLKLTFDTTFSPNTGKKSGKIKSSYKRECINLGCDVDFDFAGPAIHGSAVFGYEGWLAGY POR1_MOUSE_14_295 GLKLTFDSSFSPNTGKKNAKIKTGYKREHINLGCDVDFDIAGPSIRGALVLGYEGWLAGY POR3_BOVIN_1_282 GLKLTLDTIFVPNTGKKSGKLKASYKRDCFSLGSNVDIDFSGPTIYGWAVLAFEGWLAGY PORI_DROME_1_281 GLKLSLEGNFAPQSGNKNGKFKVAYGHENVKADSDVNIDLKGPLINASAVLGYQGWLAGY PORI_NEUCR_1_282 GLKAEGIFSFLPATNARGAKFNLHFKQSNFHGRAFFDL-LKGPTANIDAIVGHEGFLAGA POR1_YEAST_3_281 GLKNELITSLTPGV-AKSAVLNTTFTEPFFTARGAFDLCLKSPTFVGDLTMAHEGIVGGA POR4_SOLTU_3_274 GLKTILS---FRVPDQRSGKLEVQYLHDYAGICTSVGLTAN-PIVNFSGVVGTNIIALGT POR6_SOLTU_3_274 GLKTIFS---FVVPDQKSGKVELQYLHEYAGINTSIGLTAS-PLVNFSGVAGNNTVALGT POR1_ARATH_3_274 GLRSIFS---FKVPDQNSGKVELQYLHEYAGISTSMGLTQN-PTVNFSGVIGSNVLAVGT POR1_WHEAT_1_274 GLKTILS---FAVPDQKSGKVELQYLHDYAGINASIGLTAN-PVVNLSGAFGTSALAVGA **: ... .: : . ..: * . . * PORIN_HUMAN QMTFDSAKSKLTRNNFAVGYRTGDFQLHTNVN-DGTEFGGSIYQKVCEDLDTSVNLAWTS POR1_MOUSE_14_295 QMNFETSKSRVTQSNFAVGYKTDEFQLHTNVN-DGTEFGGSIYQKVNKKLETAVNLAWTA POR3_BOVIN_1_282 QMSFDTAKSKLSQNNFALGYKAADFQLHTHVN-DGTEFGGSIYQKVNEKIETSINLAWTA PORI_DROME_1_281 QTAFDTQQSKLTTNNFALGYTTKDFVLHTAVN-DGQEFSGSIFQRTSDKLDVGVQLSWAS PORI_NEUCR_1_282 SAGYDVQKAAITGYSAAVGYHAPTYSAAITATDNLSVFSASYYHKVNSQVEAGSKATWNS POR1_YEAST_3_281 EFGYDISAGSISRYAMALSYFAKDYSLGATLN-NEQITTVDFFQNVNAFLQVGAKATMNC POR4_SOLTU_3_274 DVSFDTKTGDFTKCNAGLSFTNADLVASLNLNNKGDNLTASYYHTVSPLTSTAVGAEVNH POR6_SOLTU_3_274 DLSFDTATGNFTKCNAGLSFSSSDLIASLALNDKGDTVSASYYHTVKPVTNTAVGAELTH POR1_ARATH_3_274 DVSFDTKSGNFTKINAGLSFTKEDLIASLTVNDKGDLLNASYYHIVNPLFNTAVGAEVSH POR1_WHEAT_1_274 DVSLDTATKNFAKYNAALSYTNQDLIASLNLNNKGDSLTASYYHIVE-KSGTAVGAELTH . : .: .:.: . . . :: . .. PORIN_HUMAN GTNC--TRFGIAAKYQLDPTASISAKVNNSSLIGVGYTQTLRPGVKLTLSALVDGKSINA POR1_MOUSE_14_295 GNSN--TRFGIAAKYQVDPDACFSAKVNNSSLIGLGYTQTLKPGIKLTLSALLDGKNVNA POR3_BOVIN_1_282 GSNN--TRFGIAAKYKLDCRTSLSAKVNNASLIGLGYTQTLRPGVKLTLSALIDGKNFNA PORI_DROME_1_281 GTSN--TKFAIGAKYQLDDDASVRAKVNNASQVGLGYQQKLRDGVTLTLSTLVDGKNFNA PORI_NEUCR_1_282 KTGN-TVGLEVATKYRIDPVSFVKGKINDRGVAAIAYNVLLREGVTLGVGASFDTQKLDQ POR1_YEAST_3_281 KLPNSNVNIEFATRYLPDASSQVKAKVSDSGIVTLAYKQLLRPGVTLGVGSSFDALKLSE POR4_SOLTU_3_274 SFSTNENIITVGTQHRLDPLTSVKARINNFGKASALLQHEWRPKSLFTVSGEVDTKSVDK POR6_SOLTU_3_274 SFSSNENTLTIGTQHLLDPLTTVKARVNSYGKASALIQHEWRPKSLFTISGEVDTRAIEK POR1_ARATH_3_274 KLSSKDSTITVGTQHSLDPLTSVKARVNSAGIASALIQHEWKPKSFFTISGEVDTKSIDK POR1_WHEAT_1_274 SFSSNENSLTFGTQHTLDPLTLVKARINNSGKASALIQHEFMPKSLCTISAEVDTKAIEK : ..::: * : . .::.. . :. .* .. PORIN_HUMAN GGHKVGSPWSWRLNPAERNLWEWISEDLALIYFHCDQQQAFFPPEDDQNKG POR1_MOUSE_14_295 GGHKLG---------------------LGLEFQ------------------ POR3_BOVIN_1_282 GGHKVG---------------------LGFELE------------------ PORI_DROME_1_281 GGHKIG---------------------VGLELE------------------ PORI_NEUCR_1_282 ATHKVG---------------------TSFTFE------------------ POR1_YEAST_3_281 PVHKLG---------------------WSLSF------------------- POR4_SOLTU_3_274 -GAKFG---------------------LALALK------------------ POR6_SOLTU_3_274 -SAKIG---------------------LAVALK------------------ POR1_ARATH_3_274 -SAKVG---------------------LALALK------------------ POR1_WHEAT_1_274 -SSKVG---------------------IAIALK------------------ *.* .. >gi|75677554|ref|NM_181395.1| Mus musculus peroxidasin homolog (Drosophila) (Pxdn), mRNA GGACCGGAGGGCTCAGTTGGGAGCCGGCGGTGGACGCGCCCGCCGAGGCCTCCTCCGCTGCTGTTCACGC GTGCCAGCTCCTGTCCGCGCCATCTGCCATGGCCGTGCGCCCCACGCGCCGCTGCCTGCTGGCGCTCCTG CTGTGCTTTGCCTGGTGGGCCATGGCGGTGGTCGCCTCGAAGCAAGGGGCAGGCTGTCCAAGCCGCTGCC TGTGTTTCCGTACCACCGTGCGCTGCATGCATCTGTTGCTGGAGGCCGTGCCCGCCGTGGCGCCGCAGAC CTCCATCCTAGATCTTCGGTTCAACAGAATCAGAGAGATCCAACCCGGGGCATTCAGGAGGCTGAGGAGC CTGAACACACTGCTTCTTAACAACAACCAGATCAAGAAGATCCCCAATGGTGCATTTGAGGACCTGGAGA ACTTAAAATACCTCTATTTGTACAAGAATGAGATCCAATCAATTGACAGGCAAGCATTTAAGGGACTTGC CTCTCTAGAGCAACTGTACCTGCACTTTAATCAGATAGAAACGCTGGACCCTGAATCCTTCCAGCACCTG CCAAAGCTGGAGAGACTGTTTTTGCACAACAACCGTATCACGCACTTAGTTCCTGGGACGTTCAGTCAGT TAGAGTCCATGAAACGGCTGCGATTGGACTCGAATGCACTCCACTGTGACTGTGAAATCCTATGGCTAGC GGATCTACTGAAGACCTACGCCCAATCTGGAAACGCACAAGCAGCAGCTACATGCGAGTATCCCAGACGC ATCCAAGGACGCTCTGTGGCTACCATCACCCCAGAAGAGCTGAACTGTGAAAGGCCCCGGATTACCTCAG AGCCACAGGATGCAGATGTCACCTCAGGGAACACAGTGTACTTCACCTGCAGAGCTGAGGGCAACCCCAA ACCTGAGATCATCTGGCTTCGAAACAATAACGAGTTGAGCATGAAGACGGACTCTCGCTTAAACTTGCTG GACGATGGCACGCTGATGATTCAGAACACACAGGAGGCGGATGAGGGTGTCTACCAGTGCATGGCGAAAA ATGTGGCTGGAGAGGCGAAAACGCAGGAGGTGACCCTCAGGTACTTGGGGTCTCCAGCCCGACCCACTTT TGTAATCCAGCCGCAGAACACAGAGGTACTGGTGGGTGAGAGTGTCACTCTGGAGTGCAGTGCCACAGGC CACCCTCTGCCTCAGATCACCTGGACAAGAGGTGACCGCACACCCTTGCCAATTGACCCTCGAGTGAATA TCACTCCCTCTGGAGGACTGTATATACAGAACGTCGCCCAGAGTGACAGCGGCGAGTACACGTGCTTTGC ATCCAATAGTGTGGACAGTATCCATGCCACAGCCTTCATCATTGTACAAGCCCTTCCTCAGTTCACTGTG ACCCCACAGAGCCGAGTGGTCATTGAAGGGCAGACTGTGGATTTCCAGTGTGCGGCTAAGGGACACCCTC AGCCTGTCATAGCCTGGACCAAGGGAGGGAGCCAGCTCTCAGTGGACAGGCGGCACCTGGTGCTGTCCTC AGGAACACTCAGGATTTCTGGGGTGGCCCTGCATGACCAGGGCCAGTATGAGTGCCAGGCCGTCAATATC ATTGGCTCCCAGAAGGTCGTGGCCCACCTGACAGTACAGCCTAGAGTCACCCCGGTATTTGCCAGCATTC CCAGTGACATGACTGTAGAGGTGGGCACCAACGTGCAGCTGCCTTGTAGCTCCCAGGGAGAACAAGAGCC AGCCATCACCTGGAACAAGGATGGTGTTCAGGTAACAGAAAGTGGAAAATTTCACATCAGCCCCGAAGGA TTCTTGACCATCAATGATGTTGGCACTGCCGATGCAGGTCGCTATGAGTGTGTAGCTCGGAACACAATTG GATATGCCTCTGTGAGCATGGTACTCAGTGTGAATGTTCCTGATGTAAGTCGGAATGGGGATCCCTATGT TGCTACCTCTATTGTTGAAGCCATTGCAACTGTTGACAGAGCCATCAACTCTACAAGGACACACTTGTTT GACAGCCGTCCTCGTTCTCCAAATGACCTGCTCGCTCTGTTCCGGTACCCACGGGATCCATACACAGTGG GACAAGCCAGGGCAGGAGAGATATTCGAGCGGACCCTGCAGCTGATCCAGGAGCATGTTCAGCATGGCTT GATGGTGGACTTGAATGGAACAAGTTACCACTACAATGATCTGGTGTCCCCGCAGTACCTGAGCCTCATC GCCAACCTGTCAGGCTGCACTGCACACCGCCGCGTGAACAACTGCTCAGACATGTGCTTCCACCAGAAGT ATAGGACGCACGATGGCACGTGCAACAATCTACAGCACCCGATGTGGGGTGCCTCACTGACCGCCTTTGA GCGCCTGTTGAAGGCTGTGTATGAGAATGGGTTCAACACACCCCGGGGCATTAATTCCCAGCGTCAGTAC AATGGGCATGTACTACCCATGCCCCGCCTGGTGTCCACCACACTGATTGGGACAGAGGTGATCACCCCCG ATGAGCAGTTTACACACATGCTGATGCAATGGGGCCAGTTCCTTGACCATGACCTAGACTCTACAGTGGT AGCCCTGAGCCAGGCCCGCTTCTCTGACGGCCAGCATTGCAGCTCTGTGTGCAGCAATGACCCTCCCTGT TTCTCGGTCATGATCCCCCCCAATGATCCCCGGGTGCGGAGTGGCGCCCGATGCATGTTCTTCGTGCGAT CGAGCCCCGTGTGTGGCAGCGGCATGACGTCCCTGCTCATGAACTCTGTGTACCCTCGAGAGCAGATCAA CCAGCTCACCTCCTACATCGATGCCTCCAATGTGTACGGCAGCACAGACCACGAAGCCCGCAGCATCCGG GACCTGGCCAGCCACCGTGGCCTGCTGCGTCAGGGCATTGTGCAGAGGTCTGGCAAGCCCCTGCTTCCCT TTGCCACCGGGCCACCCACTGAGTGCATGCGCGATGAGAACGAGAGCCCGATACCATGCTTTCTGGCCGG CGACCACCGTGCCAACGAGCAGCTTGGCCTGACCAGCATGCATACGCTGTGGTTCCGGGAGCACAACCGC ATTGCAGCAGAGCTGTTGAAGCTAAACCCGCACTGGGATGGGGACACTGTCTACCATGAGACCCGCAAGA TAGTCGGGGCAGAGATACAGCACATCACCTACCGGCACTGGCTGCCCAAGATCCTGGGGGAGGTGGGCAT GAAGATGCTCGGTGAGTACCGGGGCTACGACCCCAGTGTCAATGCTGGCATCTTTAATGCCTTTGCCACT GCAGCCTTCAGGTTCGGTCACACTCTGATCAACCCTCTGCTCTACCGGCTGGATGAGAACTTTGAGCCCA TCCCTCAGGGCCATGTGCCCCTCCACAAAGCCTTCTTCTCGCCCTTCCGGATTGTCAACGAGGGGGGCAT CGACCCACTTCTCCGAGGGCTGTTTGGAGTGGCAGGGAAGATGCGCATTCCCTCTCAATTGCTGAACACA GAGCTCACGGAGAGGCTGTTCTCCATGGCCCACACAGTGGCCCTGGACCTGGCTGCCATCAATATCCAGC GAGGCCGGGACCATGGCATCCCACCCTACCATGACTACAGAGTCTACTGCAACTTGTCGGCTGCTTACAC CTTTGAGGACCTGAAAAATGAGATCAAGAGCCCTGTGATCCGGGAGAAACTGCAGAGGCTGTATGGCTCG ACTCTCAACATTGATCTGTTCCCAGCCCTCATGGTAGAAGACCTAGTACCTGGCAGCCGCTTGGGGCCCA CACTCATGTGCCTGCTCAGCACACAGTTCCGACGCCTGCGGGATGGAGACAGGTTGTGGTATGAGAACCC AGGCGTGTTCTCCCCCGCCCAGCTGACTCAGCTCAAGCAGACGTCCCTGGCGAGGATCCTTTGTGACAAC TCAGACAACATCACCCGTGTGCAGCAGGATGTGTTCAGGGTGGCAGAGTTCCCCCACGGTTATAGCAGCT GTGAGGACATCCCCAGGGTGGACCTGCGAGTGTGGCAGGACTGTTGTGAAGATTGTAGGACCAGGGGACA ATTCAATGCTTTCTCCTACCATTTCCGGGGAAGACGGTCTCTAGAATTTAGCTATGAGGACGATAAGCCC ACAAAGAGAGCCAGGTGGCGGAAAGCACTAAGTGTAAAGCATGGCAAACATCTTAGCAATGCCACATCAG CCACCCACGAGCACTTGGAAGGGCCAGCAACTAATGATCTCAAGGAATTTGTTCTGGAAATGCAAAAGAT CATCACAGACCTCAGAAAACAGATAAACAGCTTGGAGTCTCGGCTCAGCACCACAGAATGTGTGGATGAC AGCGGTGAATCTCACGGCGGCAACACAAAGTGGAAAAAAGACCCATGCACAGTTTGTGAGTGCAAAAATG GCCAGATCACCTGCTTTGTGGAAGCTTGCCAGCCTGCAGCCTGCCCCCAGCCTGTGAAAGTGGAAGGCGC TTGCTGTCCCGTCTGCTTAAAGAACACTGCAGAGGAAAAGCCTTAGTGTTCCCGAGCTTAGCTCCTCGAA GCTGGTCCACAGAATACTTGTGAGCCTAGATGACAACATGGGGAGCTTCAGACCACAGGACAAGTTGGGA TCTCAGACATTTCAGGACCTCTGCTGTGCCATCGCAGAAGCAGCCGGGGCTGCTTCACACCCTGTGTTTG TAGAAGGAAATTGAGCAGGCGGGAGTGGGTGCAGGCTCTGGCCCTCACTTCATGTTAGACTTCTCAGGTT TATATTTAAGTGTTTTTAAATGGAAAATTGGTGCTACTATTAAATCACACAGTTG >gi|27924101|gb|BC044828.1| Mus musculus peroxidasin homolog (Drosophila), mRNA (cDNA clone IMAGE:5008265), partial cds CAGGGCAGGAGAGATATTCGAGCGGACCCTGCAGCTGATCCAGGAGCATGTTCAGCATGGCTTGATGGTG GACTTGAATGGGACAAGTCAGTACCATGTTCTTCCTCCTCTGACTTGAGTGCGAGGTAGCAGACACTCTC TGCTGCATGTGCATCATGTTACCACTACAATGATCTGGTGTCCCCGCAGTACCTGAGCCTCATCGCCAAC CTGTCAGGCTGCACTGCACACCGCCGCGTGAACAACTGCTCAGACATGTGCTTCCACCAGAAGTATAGGA CGCACGATGGCACGTGCAACAATCTACAGCACCCGATGTGGGGTGCCTCACTGACCGCCTTTGAGCGCCT GTTGAAGGCTGTGTATGAGAATGGGTTCAACACACCCCGGGGCATTAATTCCCAGCGTCAGTACAATGGG CATGTACTACCCATGCCCCGCCTGGTATCCACCACACTGATTGGGACAGAGGTGATCACCCCCGATGAGC AGTTTACACACATGCTGATGCAATGGGGCCAGTTCCTTGACCATGACCTAGACTCTACAGTGGTAGCCCT GAGCCAGGCCCGCTTCTCTGACGGCCAGCATTGCAGCTCAGTGTGCAGCAATGACCCTCCCTGTTTCTCG GTCATGATCCCCCCCAATGATCCCCGGGTGCGGAGTGGCGCCCGATGCATGTTCTTCGTGCGATCGAGCC CCGTGTGTGGCAGCGGCATGACGTCCCTGCTCATGAACTCTGTGTACCCTCGAGAGCAGATCAACCAGCT CACCTCCTACATCGATGCCTCCAATGTGTACGGCAGCACAGACCACGAAGCCCGCAGCATCCGGGACCTG GCCAGCCACCGTGGCCTGCTGCGTCAGGGCATAGTGCAGAGGTCTGGCAAGCCCCTGCTTCCCTTTGCCA CCGGGCCACCCACTGAGTGCATGCGCGATGAGAACGAGAGCCCGATACCATGCTTTCTGGCCGGCGACCA CCGTGCCAACGAGCAGCTTGGCCTGACCAGCATGCATACGCTGTGGTTCCGGGAGCACAACCGCATTGCA GCAGAGCTGTTGAAGCTAAACCCGCACTGGGATGGGGACACTGTCTACCATGAGACCCGCAAGATAGTCG GGGCAGAGATACAGCACATCACCTACCGGCACTGGCTGCCCAAGATCCTGGGGGAGGTGGGCATGAAGAT GCTCGGTGAGTACCGGGGCTACGACCCCAGTGTCAATGCTGGCATCTTTAATGCCTTTGCCACTGCAGCC TTCAGGTTCGGTCACACTCTGATCAACCCTCTGCTCTACCGGCTGGATGAGAACTTTGAGCCCATCCCTC AGGGCCATGTGCCCCTCCACAAAGCCTTCTTCTCGCCCTTCCGGATTGTCAACGAGGGGGGCATCGACCC ACTTCTCCGAGGGCTGTTTGGAGTGGCAGGGAAGATGCGCATTCCCTCTCAATTGCTGAACACAGAGCTC ACGGAGAGGCTGTTCTCCATGGCCCACACAGTGGCCCTGGACCTGGCTGCCATCAATATCCAGCGAGGCC GGGACCATGGCATCCCACCCTACCATGACTACAGAGTCTACTGCAACTTGTCGGCTGCTTACACCTTTGA GGACCTGAAAAATGAGATCAAGAGCCCTGTGATCCGGGAGAAACTGCAGAGGCTGTATGGCTCGACTCTC AACATTGATCTGTTCCCAGCCCTCATGGTGGAAGACCTGGTACCTGGCAGCCGCTTGGGGCCCACACTCA TGTGCCTGCTCAGCACACAGTTCCGACGCCTGCGGGATGGAGACAGGTTGTGGTATGAGAACCCAGGCGT GTTCTCCCCCGCCCAGCTGACTCAGCTCAAGCAGACGTCCCTGGCGAGGATCCTTTGTGACAACTCAGAC AACATCACCCGTGTGCAGCAGGATGTGTTCAGGGTGGCAGAGTTCCCCCACGGTTATAGCAGCTGTGAGG ACATCCCCAGGGTGGATCTGCGAGTGTGGCAGGACTGTTGTGAAGATTGTAGGACCAGGGGACAATTCAA TGCTTTCTCCTACCATTTCCGGGGAAGACGGTCTCTAGAATTTAGCTATGAGGACGATAAGCCCACAAAG AGAGCCAGGTGGCGGAAAGCGCTAAGTGTAAAGCATGGCAAACATCTTAGCAATGCCACATCAGCCACCC ACGAGCACTTGGAAGGGCCAGCAACTAATGATCTCAAGGAATTTGTTCTGGAAATGCAAAAGATCATCAC AGACCTCAGAAAACAGATAAACAGCTTGGAGTCTCGGCTCAGCACCACAGAATGTGTGGATGACAGCGGT GAATCTCACGGCGGCAACACAAAGTGGAAAAAAGACCCATGCACAGTTTGTGAGTGCAAAAATGGCCAGA TCACCTGCTTTGTGGAAGCTTGCCAGCCTGCAGCCTGCCCCCAGCCTGTGAAAGTGGAAGGCGCTTGCTG TCCCGTCTGCTTAAAGAACACTGCAGAGGAAAAGCCTTAGTGTTCCCGAGCTTAGCTCCTCGAAGCTGGT CCACAGAATACTTGTGAGCCTAGATGACAACATGGGGAGCTTCAGACCACAGGACAAGTTGGGATCTCAG ACATTTCAGGACCTCTGCTGTGCCATCGCAGAAGCAGCCGGGGCTGCTTCACACCCTGTGTTTGTAGAAG GAAATTGAGCAGGCGGGAGTGGGTGCAGGCTCTGGCCCTCACTTCATGTTAGACTTCTCAGGTTTATATT TAAGTGTTTTTAAATGGAAAATTGGTGCTACTATTAAATCACACAGTTGAGACATGGGTTTCGAAATTGC TTCGGCCTGATGATGCCACTTCTGTTTAAGCGAGGCAGAAGGTCTTTGACAGGCTTCATTTAAACAGAAG CATTTGGCAAATGGAACAGGATCTTATAAAATAATATCCTGGGCCAAAATCCCTACAGGGATACTAGGGC TTTCTCCCACTGCTCCCTCATGTCTGCCATCTTCCCCTTCAGGGCCCTTCAGCGTCTAATAACAATACCA ACACAAACCTGCACCTTGCGACCATGTCCACCCTTCTACACAGGACTGTCACATTATCAAGCCACAGTTA GAAATAATCTTGTTTCCACTTAGAACATGTGTAAATACTGCCTTGCTGTAAATTGAATGTGAAATCCTTT GGTCCTATGCCATGTTGAGTGACCCGAACAGCCCCTTGCATCGGCAGGATGGTCTGCAGCCACCACCTGC CTTGGTTCCTTGGTACACCGGCCATGGTGTAGGGAGGGTGATTCACTCTCCAGGTCCTTTGAATAGGTGA CAGACAGGCAGAGCCTGAATGTCAGGAAATTCCATTGTATGAATGCTTTAATGGAAAACGTTCCCTATAC CTCATTATTTTTTATTGCATGATGTTTTATAAAAATTTGCCCATTTTAGATGTTAGAAAAATTATTTCCA CTATGCAAATTTCTTTTTAATTCAGTGAAAAGCAACTGTTATACCTCATAGTCTCTTGTTTTTAATTGAC CAAAATATTCCATTCTATTCTCACAAGGTTCTGAGGTCTCTGCCTGAAAAAGCAAGTCTCACCCTATAGA CACTGATGTGCCCAGCACTACGTGCCAGCCATTGTGGGAACACAAGAGGGTCACCTGCCCAAGGGCTAGG GAGGAAGACCTCAAGAACACAGAGGAGGTGGAAAAGGACAAAATAGGTGCCATTTTAGGGAGACCATGGT CAGATAGGGGGATGCTCAGTTCCTTGCAGCCTCGGGCGGGCTTATGTCGGCACTAAGGCCATTGTGGTGT GTACTTATATGATCCCTATGCTGATAGGATTACCTTCCTAGACATAGCTAGACGCAAAGCCACATGTGTA AGGCTGCTGAGCAAAGACAGCATCCCAGCATGGGTGTGTTCACGGTGGATTCACCACGTTGCATAGTAAA GTGGTCCCCTTGGCTTACCCTTCACTTTGCTCATGAGATTCAGAAGCTTGTGGTCCAGCAGGGGTGAGCA TTTGTGAAATAGTAAGCTGAACTTAGTGGTGAGATTTCAGAACAGACTTCTGTGAAGTAAGAGATGTAAC CATGCATCTAAAATCGGATGGCCGTGTAACTGCTCGGGCATAGAAATGGTGGGAGAACCTGTCCTGGGTA CCTGGCATTTCACATGAGCCCAGGGATATGTCTTGTGCCAAGGCACACAAGTGTCCGTGGACTTGGACAG GTGCCAAGGGTTTTTGTCTCTGTTCCTATGTGGGAGGCTGGCTGTGATTTACATTAATTTCTGTATTTCA AACGAAGATGTCTGCAGATCTCCATTTTGATGTTACAGCCTCATTGCCCAGGCAGTGGGCAGTGGCCAGA CACCCTTTCTGACTAGCCACTGCATTGGGCTTCTGTGATTCAAAGTAGTGTATATATTTATTTACTTCTC TGACTGTGGCCAACAGCCAAATGCCATTTTATGTTCCTTGTATTCAGTCCATTACCAAAGAGGTGTTTGC ACTTTGTAATGATACCTTTCAGTTCAAATAAAAGGACCACATCGTTAAGTGGAAAAAAAAAAAAAAAAAA AAAAAAAAAAAAAAAAAAAAAAAAAAAAAA >gi|147905582|ref|NP_001081848.1| polysomal ribonuclease 1 [Xenopus laevis] Peroxidasin MAPADLWLGVLLILASVQGTASSYYDGVEELDNNLILSCTKEAKHLVDTAYKNTRLMLKDRLRRRTVSAS DLMAYFKQPVCSRNAIRAADYMGTTLQLLSHKLKPFHHRPFNITELLTETQIDAIYKLTGCAYQHLPSAC QESPYRTITGQCNNRKNPILGASNTGFTRLLPVVYEDGLSVPRGWTENLPINGFPLPLARAVSNEIVRFP NENLTLDEGRALIFMQWGQWTDHDLDLSPETPARSTFLEGIDCDTNCAKEPPCFPLKIPPNDPRISNQSD CIPLFRSSPVCTPGSPVREQINILTSFIDGSQVYGSDWPLAVKLRNNTNQLGLMAINQRFTDNGLPFLPF ETAEEDFCVLTNRSSGIPCFLGGDPRVSEQPGLTAFHTLFVRAHNNIAARLRELNPRWSGETLYQEARKI IGGILQKITYKDWLPLLLGSEMAAVLPAYRSYNESVDPRVSNVFTVVFRMGHTLIQPFIYRLADGYRPLG PEPQIPLHKTFFNSWRVVREGGIDPLLRGLMANRAKLNRQNQLVVDELRERLFVLFKRIGLDLTAINMQR GREHGLPGYNAWRRFCGLSAPSNVNELAAVLNNRNLAEKFIKLYGSPENIDIWVGGVAESLVRNGRIGKL LTCLIGNQFRRARDGDRFYYEQPSVFTNEQRASIERVTLARVICDNTKITEVPRNVFLGNRYPRDFVACS RIPTLDLNPWKVA