Computer Resources

Bioinformatics Infrastructure at the Guda Lab


The lab is equipped with state of the art computer facility. The lab currently owns three Dell servers used for bioinformatics research in the lab. The IT support for all of the servers is provided by the ITS Department at University of Nebraska Medical Center. All the servers are loaded with all essential bioinformatics tools and software.

hdrive

Servers
Name Specifications
Husker(HPC-Cluster)
  • Number of nodes: 4
    • Intel Xeon Gold 6138 2.0G, 20C/40T, 10.4GT/s , 27M Cache, Turbo, HT (125W) DDR4-2666
    • 512GB memory/node, RDIMM 2666MT/s Dual Rank
    • 80 Cores/node
  • Total memory: 2TB
  • Total # of CPU: 320
  • Storage: 208TB - 15K RPM SAS 12Gbps 512n 2.5in Hot-plug Hard Drive
Golgi
  • Intel XeonE5620 2.4Ghz, 12M Cache,Turbo, HT, 1066MHz Max Mem
  • 16GB Memory (4x4GB), 1066Mhz Dual Ranked RDIMMs for 2 Processors
  • 6TB: 6 * 1TB 7.2K RPM Self-Encrypting Near-line SAS 6Gbps 2.5in Hot-plug Hard Drive,FIPS140-2
Carcinoma
  • 24 Cores - Intel Xeon X5670, 2.93Ghz, 12M Cache,Turbo, HT, 1333MHz Max Mem
  • 64GB Memory (16x4GB), 1066MHz Dual Ranked RDIMMs for 2 Processors, Optimized
  • 2.9TB: 5 X 600GB(2.9TB) 15K RPM SA SCSI 6Gbps 3.5in Hotplug Hard Drive
Metastasis
  • 48 Cores - 2x Intel Xeon E7540 2.00GHz, 18M cache, 6.40 GT/s QPI, Turbo, HT, 6C, 1066MHz Max Mem
  • 128GB Memory (32x4 GB), 1066MHz, Quad Ranked RDIMMs for 2 or 4 Processors
  • 8TB: 4 * 2TB 7.2K RPM Near-line SAS 6Gbps 3.5in Hot-plug Hard Drive, Customer Installation
CBSB
  • 160 cores - Intel(R) Xeon(R) CPU E7- 8850 @ 2.00GHz
  • 512GB Memory
  • 202TB SATA RAID
Firefly/Tusker

 
*Click here for server diagram.