{"id":4643,"date":"2023-09-12T22:17:59","date_gmt":"2023-09-13T03:17:59","guid":{"rendered":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/?p=4643"},"modified":"2023-09-12T22:18:06","modified_gmt":"2023-09-13T03:18:06","slug":"how-evasive-and-transmissible-is-the-newest-omicron-offshoot-ba-2-86-that-causes-covid-19","status":"publish","type":"post","link":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/2023\/09\/12\/how-evasive-and-transmissible-is-the-newest-omicron-offshoot-ba-2-86-that-causes-covid-19\/","title":{"rendered":"How evasive and transmissible is the newest omicron offshoot, BA.2.86, that causes\u00a0COVID-19?"},"content":{"rendered":"<div class=\"panel body-content\"><div class=\"panel__container\">\n<p><a href=\"https:\/\/theconversation.com\/how-evasive-and-transmissible-is-the-newest-omicron-offshoot-ba-2-86-that-causes-covid-19-4-questions-answered-212453\">The Conversation<\/a> <\/p>\n\n\n\n<h2 class=\"wp-block-heading\">1. What is BA.2.86 and how is it related to earlier variants?<\/h2>\n\n\n\n<p>BA.2.86, nicknamed Pirola, is a highly mutated new omicron sublineage of SARS-CoV-2 that was first detected in Denmark in July 2023. The World Health Organization announced that, as of Sept. 6, 2023, BA.2.86&nbsp;<a href=\"https:\/\/www.who.int\/publications\/m\/item\/virtual-press-conference-on-global-health-issues-transcript---6-september-2023\">has been detected in 11 countries<\/a>.<\/p>\n\n\n\n<p>A variant is an alternate version of a virus \u2013 in this case, the\u00a0<a href=\"https:\/\/www.cdc.gov\/coronavirus\/2019-ncov\/variants\/variant-classifications.html#anchor_1633452601080\">SARS-CoV-2 virus that causes COVID-19<\/a>\u00a0\u2013 that has some mutations or changes in its genetic code, compared with the original. Mutations can alter the behavior of the viruses in various ways, such as how effectively they break into cells and how rapidly they can replicate. <\/p>\n\n\n\n<p>The&nbsp;<a href=\"https:\/\/www.who.int\/activities\/tracking-SARS-CoV-2-variants#\">WHO names these variants<\/a>&nbsp;using Greek alphabet letters, like alpha, delta and omicron. However, another naming system called the PANGO, or pangolin \u2013 short for&nbsp;<a href=\"https:\/\/cov-lineages.org\/resources\/pangolin.html\">phylogenetic assignment of named global outbreak lineages<\/a>&nbsp;\u2013 tracks variants and their offshoots by way of a lineage system.<\/p>\n\n\n\n<p>Think of it as a family tree for the virus, which is grouped into different lineages, like branches on a tree. The omicron variant is like a big family, and its known family members \u2013\u00a0<a href=\"https:\/\/theconversation.com\/what-is-the-new-covid-19-variant-ba-2-and-will-it-cause-another-wave-of-infections-in-the-us-179619\">BA.2<\/a>, BA.2.86 and XBB.1.5 \u2013 are all branches \u2013 or lineages and sublineages \u2013 on the same tree. <\/p>\n\n\n\n<h2 class=\"wp-block-heading\">2. What is most unique about BA.2.86?<\/h2>\n\n\n\n<p>After the omicron variant showed up in November 2021, it didn\u2019t stay the same for long. It kept changing, and soon we got different sublineages of it, such as BA.2, BA.4 and BA.5. The one that\u2019s been dominant globally for most of 2023, called XBB.1.5,&nbsp;<a href=\"https:\/\/www.who.int\/news\/item\/27-10-2022-tag-ve-statement-on-omicron-sublineages-bq.1-and-xbb\">originated from the mixing<\/a>, or&nbsp;<a href=\"https:\/\/doi.org\/10.1016\/j.chom.2023.05.003%20two%20separate\">recombination, of two separate sublineages<\/a>.<\/p>\n\n\n\n<p>But what\u2019s interesting is that BA.2.86, the newest sublineage on the scene, seems to have come from the older BA.2 omicron lineage that was dominant in early 2022 and not from the newer omicron offshoots.<\/p>\n\n\n\n<p>A preliminary study reported that BA.2.86 features&nbsp;<a href=\"https:\/\/doi.org\/10.1101\/2023.09.01.555815\">33 distinct spike mutations<\/a>&nbsp;when compared to its precursor, BA.2. The spike proteins, which form the knobby protrusions coming off the main body of the virus, are like a key that the virus uses to unlock our cells, which is how a new infection begins.<\/p>\n\n\n\n<p>After an infection by one of the variants that cause COVID-19, our bodies create antibodies that target the spike protein to help neutralize the virus and prevent it from infecting cells. So, numerous changes in the spike protein of BA.2.86 could potentially affect how well it evades antibodies as well as the degree of disease severity it causes.<\/p>\n\n\n\n<p>Among the new mutations that BA.2.86 carries, 14 reside within an area of the spike protein called the receptor binding domain, which binds to the receptors on host cells. This suggests that BA.2.86 could have a greater capacity for infecting than its predecessor.<\/p>\n\n\n\n<p>In addition, the new sublineage, BA.2.86, is even more dissimilar when compared to the most recent sublineage, XBB.1.5, with&nbsp;<a href=\"https:\/\/doi.org\/10.1101\/2023.09.01.555815\">35 new mutations in the spike protein<\/a>&nbsp;\u2013 including some unusual mutations \u2013 than to its precursor, BA.2. These alterations intrigue infectious disease specialists like me, and we are working to understand how they might affect this new variant\u2019s behavior.<\/p>\n\n\n\n<h2 class=\"wp-block-heading\">3. How concerning are the new variant\u2019s mutations?<\/h2>\n\n\n\n<p>We researchers do not yet fully understand what these changes might mean and the degree to which BA.2.86 can get around our protective defenses.<\/p>\n\n\n\n<p>Scientists and&nbsp;<a href=\"https:\/\/www.cdc.gov\/coronavirus\/2019-ncov\/variants\/variant-classifications.html\">health authorities closely monitor<\/a>&nbsp;all emerging variants and lineages for changes that can affect how easily the virus is transmitted, what it might mean for vaccine effectiveness and the severity of disease it can cause. While mutations can be cause for concern, it\u2019s important to remember that not all mutations lead to increased danger.<\/p>\n\n\n\n<p>The earlier-mentioned preliminary study found that BA.2.86&nbsp;<a href=\"https:\/\/doi.org\/10.1101\/2023.09.01.555815\">can escape the protective defenses of<\/a>&nbsp;antibodies against the recent XBB sublineages. However, in contrast, another new study that has not yet been published found that neutralizing antibody responses against BA.2.86 were&nbsp;<a href=\"https:\/\/doi.org\/10.1101\/2023.09.04.556272\">comparable to or slightly higher<\/a>&nbsp;against the recent XBB sublineages. Hence further studies are needed to understand BA.2.86\u2019s ability to escape antibody protection.<\/p>\n\n\n\n<p>The emergence of BA.2.86 underscores the need for flexibility in current vaccine strategies to ensure continued effectiveness against these new variants. The newly&nbsp;<a href=\"https:\/\/www.nytimes.com\/2023\/09\/11\/health\/covid-vaccine-boosters-fda-pfizer-moderna.html\">FDA-approved fall 2023 COVID-19 booster shots<\/a>&nbsp;are formulated to target XBB.1.5, which was dominant in early 2023 when public health officials made the reformulation decisions. The&nbsp;<a href=\"https:\/\/theconversation.com\/will-omicron-specific-booster-shots-be-more-effective-at-combating-covid-19-5-questions-answered-189610\">2022 booster shot<\/a>&nbsp;was designed to target both the original strain of SARS-CoV-2 as well as the BA.4 and BA.5 omicron lineages.<\/p>\n<\/div><\/div>","protected":false},"excerpt":{"rendered":"<p>The Conversation 1. What is BA.2.86 and how is it related to earlier variants? BA.2.86, nicknamed Pirola, is a highly mutated new omicron sublineage of SARS-CoV-2 that was first detected in Denmark in July 2023. The World Health Organization announced that, as of Sept. 6, 2023, BA.2.86&nbsp;has been detected in 11 countries. A variant is [&hellip;]<\/p>\n","protected":false},"author":11,"featured_media":0,"comment_status":"open","ping_status":"closed","sticky":false,"template":"","format":"standard","meta":{"_jetpack_memberships_contains_paid_content":false,"footnotes":"","jetpack_publicize_message":"","jetpack_publicize_feature_enabled":true,"jetpack_social_post_already_shared":true,"jetpack_social_options":{"image_generator_settings":{"template":"highway","default_image_id":0,"font":"","enabled":false},"version":2}},"categories":[11],"tags":[],"class_list":["post-4643","post","type-post","status-publish","format-standard","hentry","category-covid"],"jetpack_publicize_connections":[],"jetpack_featured_media_url":"","jetpack_sharing_enabled":true,"_links":{"self":[{"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/posts\/4643","targetHints":{"allow":["GET"]}}],"collection":[{"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/posts"}],"about":[{"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/types\/post"}],"author":[{"embeddable":true,"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/users\/11"}],"replies":[{"embeddable":true,"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/comments?post=4643"}],"version-history":[{"count":1,"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/posts\/4643\/revisions"}],"predecessor-version":[{"id":4644,"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/posts\/4643\/revisions\/4644"}],"wp:attachment":[{"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/media?parent=4643"}],"wp:term":[{"taxonomy":"category","embeddable":true,"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/categories?post=4643"},{"taxonomy":"post_tag","embeddable":true,"href":"https:\/\/www.unmc.edu\/healthsecurity\/transmission\/wp-json\/wp\/v2\/tags?post=4643"}],"curies":[{"name":"wp","href":"https:\/\/api.w.org\/{rel}","templated":true}]}}