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NEW: Mass Spectrometry Textbook by Jurgen H. Gross available for FREE download for a limited time!
https://link.springer.com/book/10.1007/978-3-319-54398-7
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ASMS Presentations - Basics, Fundamentals, Drug discovery, Quality control, Forensics and Imaging
BioGRID - Curated biological database of protein-protein interactions, genetic interactions, chemical interactions and PTMs
Blast - NCBI Basic Local Alignment Search Tool
ChemCalc - Molecular mass calculator
Commonly observed ions in ESI spectra - from University of Alberta
Cytoscape - Software for visualizing complex protein networks
Delta Mass - Database of protein PTMs
Entrez - NCBI database search and retrieval system
ExPASy - Bioinformatics resource portal
GeneONTOLOGY AmiGO - Set of tools for GO database search. Search for annotations, ontology, genes and gene products
GeneONTOLOGY PANTHER - Tool for protein classifications in high-throughput analysis. Proteins are classified according to their family, molecular function, biological process and pathway
Integrative Omics Software (by PNL) - Tools and software
IonSource - Tools and tutorials
Mascot - Online database search for protein IDs
MS Tools for Mass Spec Users (by SIS) - Tools including mass spectrum generator and periodic table
PRIDE - Resource that stores mass spectrometry-based protein expression data, including spectra, peptide and protein identifications, derived from user submissions.
Proteomics Tools (from the Institute for Systems Biology) - Tools including MS/MS fragment ion calculator and protein digestor
PubChem - Database of small molecules
Reactome - Proteins and pathways analysis tool
Scaffold - Download free viewer to read Scaffold files
SharedProteomics - An online proteomics community
STRING - Database of known and predicted protein-protein interactions
IUPAC interactive periodic table - Elements and isotopes
Unimod - Public domain database of protein modifications for MS
Uniprot - Resource for protein sequences, annotations and databases
Venny - An interactive tool for comparing lists with Venn's diagrams
WebGestalt - Tool for functional enrichment analysis
- Core Facility Directory
- Clinical Research Resources
- Nebraska Biobank
- Grant Editing Support
- Grant Resource Library
- Centers and Major Programs
- Sponsored Programs Administration (SPA)
- Comparative Medicine
- Government Relations
- Intellectual Property Assistance
- Inter-Campus Shuttle
- Translational Cores
- Advanced Microscopy Core Facility
- Animal Behavior Core
- Biosafety Level 3 (BSL-3) Core Facility
- Computational Chemistry
- Electron Microscopy
- Epigenomics Core Facility (ECF)
- Flow Cytometry Research Facility
- Genomics Core Facility
- Human Magnetic Resonance Imaging
- Mass Spectrometry and Proteomics Core Facility
- Instruments
- Proteomics Protocols
- Services & Rates
- Policies
- Contact Us
- Reserve Instruments
- Our Team
- Publications
- Tools/Links
- Sample Submission
- MSPCF News
- Acknowledging the Core
- Bioinformatics
- Newsletter
- Mouse Genome Engineering Core
- Nanoimaging Core Facility
- Small Animal Imaging
- Translational Mouse Model Core Facility
- Core Facility Scheduling and Billing