Publications

 
 

2022

 

Alhousami T, Diny M, Ali F, Shin J, Kumar G, Kumar V, Campbell J, Noonan V, Hanna G, Denis G, Monti S, Kukuruzinska M, Valeras X, Bais M
Mol Cancer Res,  OF1–OF10
Contribution to journal>Article 
 
Phosphoproteome of signalling by ErbB2 in ovarian cancer cells
Sidhanth C, Bindhya S, Krishnapriya S, Manasa P, Shabna A,  Alifia J, Patole C, Kumar V, Garg M, Ganesan T
Biochim Biophys Acta
Contribution to journal>Article 
 
Regulation of Schwann cell and DRG neurite behaviours within decullarized peripheral nerve matrix
Xue W, Kong Y, Abu R, Roy P, Huh S-H, Kuss M, Kumar V, Duan B
ACS Appl Mater Interfaces, 14, 7, 8693–8704
Contribution to journal>Article 
 
Stapling proteins in the RELA complex inhibits TNFα-induced nuclear translocation of RELA
Kour S, Rana S, Kizhake S, Lagundzin D, Klinkebiel D, Mallareddy J, Huxford T, Woods N, Natarajan A
RSC Chem Biol, 3, 32-36
Contribution to journal>Article 
 
MUC5AC serves as the nexus for b-catenin/c-Myc interplay to promote glutamine dependancy during pancreatic cancer chemoresistance
Ganguly K, Bhatia R, Rauth S, Kisling A, Atri P, Thompson C, Vengoji R, Kishn SR, Shinde D, Thomas V, Kaur S, Mallya K, Cox J, Kumar S, Batra S
Gastroenterology, 162, 253-268
Contribution to journal>Article 
 
Reduction in O-glycome induces differentially glycosylated CD44 to promote stemness and metastasis in pancreatic cancer
Leon F, Seshacharyulu P, Nimmakayala R, Chugh S, Karmakar S, Nallasamy P, Vangoji R, Cox J, Mallya K, Batra S, Ponnusamy M
Oncogene, 41, 57-71
Contribution to journal>Article (Acknowledgement)
 
 

2021 

 
 
Campbell C, Fingleton C, Zeden M, Bueno E, Gallagher L, Shinde D, Ahn J, Olson H, Fillmore T, Adkins J, Razvi F, Bayles K, Fey P, Thomas V, Cava F, Clair G, O'Gara J
mBio, 12(3):e0053021
Contribution to journal>Article 
 
Cobb D, Smith N, Deodhar S, Bade A, Gautam N, Shetty B, McMillan J, Alnouti Y, Cohen S, Gendelman H, Adagwa B 
Nat Commun, 125458
Contribution to journal>Acknowledgement 
 
Abdelmoaty M, Yeapuri P, Machhi J, Olson K, Shahjin F, Kumar V, Zhou Y, Liang J, Pandey K, Acharya A, Byrareddy S, Mosley R, Gendelman H
biorXiv, Preprint
Contribution to journal>Article 
 
Albendazole enhances apoptosis through targeting RNF20/Eg5 interaction in colon cancer cells
Fatima I, Ahmad R, Gowrikumar S, Barman S, Abu R, Kumar V, Singh A, Dhawan P
Abstract 936, AACR 2021, Philadelphia, PA
Contribution to journal> Meeting Abstract 
 
Shifting proteomes: limitations in using the BioID proximity labeling system to study SNARE protein trafficking during infection with intracellular pathogens 
Jorgenson L, Olson-Woods M, Rucks L
Pathog Dis, 79, ftab039
Contribution to journal>Article (Acknowledgement) 
 
SWATH-MS and MRM: Quantification of Ras-related proteins in HIV-1 infected and methamphetamine-exposed human monocyte-derived macrophages (hMDM)
Macur K, Zieschang S, Lei S, Morsey B, Jaquet S, Belshan M, Fox H, Ciborowski P
Proteomics, e2100005
Contribution to journal>Article (Acknowledgement) 
 
Skeletal muscle Nrf2 contributes to exercise - evoked systemic antioxidant defense via extracellular vesicular communication
Gao L, Wang HJ, Tian C, Zucker I
Exerc Sport Sci Rev, 49, 213-222
Contribution to journal>Article (Acknowledgement) 
 
Safety, tolerability, and immune-biomarker profiling for year-long sargramostim treatment of Parkinson's disease
Olson K, Namminga K, Lu Y, Schwab A, Thurston M, Abdelmoaty M, Kumar V, Wojtkiewitz M, Obaro H, Santamaria P, Mosley R, Gendelman H
EBioMedicine, 67, 103380
Contribution to journal>Article
 
Short and robust anti-infective lipopeptides engineered based on the minimal antimicrobial peptide KR12  of human LL-37
Narayana J, Golla R, Mishra B, Wang X, Lushnikova T, Zhang Y, Verma A, Kumar V, Xie J, Wang G
ACS Infect Dis, 7, 6, 1795-1808
Contribution to journal>Article
 
A comparative analysis of erythropoietin and carbamoylated erythropoietin proteome profiles
Tiwari N, Sathyanesan M, Kumar V, Newton S
Life, 11, 359
Contribution to journal>Article
 
Small molecule binding to inhibitor of nuclear factor kappa-B kinase subunit beta in an ATP non-competitive manner
Napoleon J, Singh S, Rana S, Bendjennat M, Kumar V, Kizhake S, Palermo N, Ouellet M, Huxford T, Natarajan A
ChemComm, 57, 4678-4681
Contribution to journal>Article
  
Lipid membrane droplet proteome remodeling parallels ethanol-induced hepatic steatosis and its resolution
Casey C, Donohue T, Kubik J, Kumar V, Naldrett M, Woods N, Frisbie C, McNiven M, Thomes P
J Lipid Res, 62, 100049
Contribution to journal>Article
 
Beaver M, Lagundzin D, Thapa I, Lee J, Ali H, Kielian T, Skar G
Infect Immun, 89, 4, e00531-20
Contribution to journal>Article
 
Cho EA, Zhang P, Kumar V, Kavalchuk M, Zhang H, Huang Q, Duncan J, Wu J
Structure, 29, 4, 320-329.e4
Contribution to journal>Article
  

2020

 

Age related extracellular matrix and interstitial cell phenotype in pulmonary valves
Wu S, Kumar V, Xiao P, Kuss M, Lim JY, Guda C, Butcher J, Duan B
Sci Rep, 10, 21338
Contribution to journal>Article
 
Natarajan C, Signore A, Kumar, Weber R, Fago A, Storz J
Biochem J, 477, 3839-3850
Contribution to journal>Article
 
Bosch M, Bertrand B, Heim C, Alqarzaee A, Chaudhari S, Aldich A, Fey P, Thomas V, Kielian T
mBio, 11, 5, e01581-20
Contribution to journal>Article (Ackowledgement)
DOI:10.1128/mBio.01581-20
 
Kinome profiling of primary endometrial tumors using multiplexed inhibitor beads and mass spectrometry identifies SRPK1 as candidate therapeutic target
Kurimchak AKumar VHerrera-Montávez CJohnson KSrivastava NDevarajan KPeri SQi Cai K, Mantia-Smaldone G, Duncan J
Mol Cell Proteomics, mcp.RA120.002012
Contribution to journal>Article
 
Franzen A, Lam T, Williams K, Nairn A, Duman R, Satyanesan M, Kumar V, Carpenter L, Newton S
BMC Psychiatry, 20, 481
Contribution to journal>Article
 
Label free quantitative proteomic using Progenesis QI proteomics reveals novel mechanism of redox regulation of skeletal muscles
Kumar V, Gao L, Rudebush T, Yu L, Schultz H, Zucker I
J Biomol Tech, 31(suppl): S19
Contribution to journal>Abstract
 
Gao L, Kumar V, Vellichirammal NN, Park SY, Rudebush T, Yu L, Son WM, Pekas E, Wafi A, Hong J, Xiao P, Guda C, Wang HJ, Schultz H, Zucker I
J Physiol, 598, 23, 5427-5451
Contribution to journal>Article
 
Struwe W, Emmott E, Bailey M, Sharon M, Sinz A, Corrales F, Thalassinos K, Braybrook J, Mills C, Barran P, COVID-19 MS Coalition
Lancet, 395, 10239, 1761-1762
Contribution to journal>Article (Letter)
 
Role of brain derived extracellular vesicles in decoding sex differences associated with nicotine self-administration
Koul S, Schaal V, Chand S, Pittenger S, Vellichirammal N, Kumar V, Guda C, Bevins R, Yalamanchili S, Pendyala G
Cells, 9, 1883
Contribution to journal>Article
 
Kurimchak A, Herrera-Montavez C, Brown J, Johnson K, Sodi V, Srivastava N, Kumar V, Delhimi S, O'Brien S, Peri S, Mantia-Smaldone G, Jain A, Winters R, Cai K, Chernoff J, Connolly D, Duncan J
Sci Signal, 13, 619, pii: eaax8238
Contribution to journal>Article
DOI: 0.1126/scisignal.aax8238
 
Hembram D, Negi H, Biswas P, Tripathi V, Bhushan L, Shet D, Kumar V, Das R
J Mol Biol, pii: S0022-2836(20)30073-5
Contribution to journal>Article
DOI: 10.1016/j.jmb.2020.01.021
 
Swenson S, Gilbeath T, Vahle H, Hynes-Smith W, Graham J, Law HCH, Amador C, Woods N, Green M, Buckley S
Blood, 136, 3, 299-312
Contribution to journal>Article (Acknowledgement)
 
Toker L, Silman I, Zeev-Ben-Mordehai T, Sussman J, Schopfer L, Lockridge O 
Chem Biol Interact, 319, 1090007
Contribution to journal>Article (Acknowledgement)
 
Biberoglu K, Schopfer L, Tacal O, Lockridge O
Anal Biochem, 600, 113718
Contribution to journal>Article (Acknowledgement)
 
Chlorpyrifos oxon-induced isopeptide bond formation in human butyrylcholinesterase
Biberoglu K, Tacal O, Schopfer L, Lockridge O
Molecules, 25, 3, 533
Contribution to journal>Article (Acknowledgement)
 
Almikhlafi M, Stauch K, Villeneuve L, Purnell V, Lamberty B, Fox H
Sci Rep, 10, 1, 13719
Contribution to journal>Article (Acknowledgement)
 
Gupta R, Leon F, Thompson C, Nimmakayala R, Karmakar S, Nallasamy P, Chugh S, Prajapati D, Rachagani S, Kumar S, Ponnusamy M
Br J Cancer , 122, 11, 1661-1672
Contribution to journal>Article (Acknowledgement)
 
Structure and function of crocodilian hemoglobins and allosteric regulation by chloride, ATP and CO2
Fago A, Natarajan C, Pettinati M, Hoffmann F, Wang T, Weber R, Drusin S, Issoglio F, Marti M, Estrin D, Storz J
Am J Physiol Regul Integr Comp Physiol, 318, 3, R657-R667
Contribution to journal>Article (Acknowledgement)
 
Law HC, Lagundžin D, Clement E, Qiao F, Wagner Z, Krieger K, Costanzo-Garvey D, Caffrey T, Grem J, DiMaio D, Grandgenett P, Cook L, Fisher K, Yu F, Hollingsworth MA, Woods N
Clin Cancer Res, 26, 5, 1065-1076
Contribution to journal>Article
 

2019

 
Mary B, Maurya S, Kumar M, Bammidi S, Kumar V, Jayandharan G
Mol Pharm 2019, 16, 4738-4750
Contribution to journal>Article
 
Kumar R, Mohammad A, Saini R, Chahal A, Wong C, Sharma D, Kaur S, Kumar V, Winterbourn C, Saini A 
Free Radic Biol Med, 145, 321-329
Contribution to journal>Article
 
Olson M, Widner R, Jorgenson L, Lawrence A, Lagundzin D, Woods N, Ouellette S, Rucks E
Infect Immun, 87, 11
Contribution to journal>Article
 
Prakash A, Ahmad S, Majumder S, Jenkins C, Orsburn B
J Am Soc Mass Spectrom, 30, 2408-2418
Contribution to journal>Article (Acknowledgement)
 
Lagundzin D, Hu WF, Law HC, Krieger K, Qiao F, Clement E, Drincic A, Nedic O, Naldrett M, Alvarez A, Woods N
PLoS One, 14,8, e0220568
Contribution to journal>Article
 
Skar G, Beaver M, Aldrich A, Lagundzin D, Thapa I, Woods N, Ali H, Snowden J, Kielian T
Infect Immun, 87, 9
Contribution to journal>Article
 
CTDP1 regulates breast cancer survival and DNA repair though BRCT-specific interactions with FANCI
Hu WF, Krieger K, Lagundzin D, Li X, Cheung R, Taniguchi T, Johnson K, Bessho T, Monteiro A, Woods N
Cell Death Discov, 5, 105
Contribution to journal>Article
 
Mary B, Maurya S, Arumugam S, Kumar V, Jayandharan G
FEBS J, 286, 24, 4964-4981
Contribution to journal>Article
 
Harms R, Borengasser K, Kumar V, Sarvetnick N
Front Cell Dev Biol, 7, 46
Contribution to journal>Article
 
Proteomic and functional analyses of Keap1-Nrf2 pathway in skeletal muscle
 

2018

 

Tetramer organizing polyproline-rich peptides identified by mass spectrometry after release of the peptides from Hupresin-purified butyrylcholinesterase tetramers isolated from milk of domestic pig (Sus scrofa)
Saxena A, Belinskaya T, Schopfer L, Lockridge O
Data Brief, 20, 1607-1619
       Contribution to journal>Article (Acknowledgement)
       DOI: 10.1016/j.dib.2018.08.109
 
Onder S, Schopfer L, Tacal O, Blake T, Johnson R, Lockridge O
Chem Res Toxicol, 31, 6, 520-530
       Contribution to journal>Article (Acknowledgement)
 
Dragana Lagundzin and Nicholas Woods
Poster 666, ASMS 2018, San Diego, CA, US
       Contribution to journal>Meeting Abstract
 
Law HCLagundzin DWagner Z, Woods N
Abstract 5647, AACR 2018, Chicago, IL, US
Contribution to journal>Meeting Abstract